3KIG Lyase date Nov 02, 2009
title Mutant Carbonic Anhydrase II In Complex With An Azide And An
authors J.Schulze-Wischeler, N.U.Niehage, A.Heine, G.Klebe
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Fragment: Carbonic Anhydrase II
Synonym: Carbonic Anhydrase II, Ca-II, Carbonate Dehydratas Carbonic Anhydrase C, Cac;
Ec: 4.2.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 Codon+
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t1
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.400 41.400 72.300 90.00 104.10 90.00
method X-Ray Diffractionresolution 1.39 Å
ligand DA4, DA9, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStereo- and Regioselective Azide/Alkyne Cycloadditions in Carbonic Anhydrase II via Tethering, Monitored by Crystallography and Mass Spectrometry., Schulze Wischeler J, Sun D, Sandner NU, Linne U, Heine A, Koert U, Klebe G, Chemistry. 2011 May 16;17(21):5842-51. doi: 10.1002/chem.201002437. Epub, 2011 Apr 19. PMID:21506176
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (3kig.pdb1.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 3KIG
  • CSU: Contacts of Structural Units for 3KIG
  • Structure Factors (351 Kb)
  • Retrieve 3KIG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KIG from S2C, [Save to disk]
  • Re-refined 3kig structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KIG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KIG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KIG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kig_A] [3kig]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3KIG: [Carb_anhydrase ] by SMART
  • Other resources with information on 3KIG
  • Community annotation for 3KIG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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