OCA Atlas for 3KR4

3KR4

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

1PE, BES, CO3, MG, SO4, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
J, E, F, D, C, I, L, G, H, B, A, K

Primary reference

Structure of the Plasmodium falciparum M17 aminopeptidase and significance for the design of drugs targeting the neutral exopeptidases., McGowan S, Oellig CA, Birru WA, Caradoc-Davies TT, Stack CM, Lowther J, Skinner-Adams T, Mucha A, Kafarski P, Grembecka J, Trenholme KR, Buckle AM, Gardiner DL, Dalton JP, Whisstock JC, Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2449-54. Epub 2010 Jan 21. PMID:20133789

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1965 Kb) [Save to disk]

Biological Unit Coordinates (3kr4.pdb1.gz) 975 Kb

Biological Unit Coordinates (3kr4.pdb2.gz) 985 Kb

LPC: Ligand-Protein Contacts for 3KR4

CSU: Contacts of Structural Units for 3KR4

Structure Factors (27757 Kb)

Retrieve 3KR4 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3KR4 from S2C, [Save to disk]

Re-refined 3kr4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3KR4 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3kr4] [3kr4_A] [3kr4_B] [3kr4_C] [3kr4_D] [3kr4_E] [3kr4_F] [3kr4_G] [3kr4_H] [3kr4_I] [3kr4_J] [3kr4_K] [3kr4_L]

SWISS-PROT database: [Q8IL11]

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