3KRR Transferase date Nov 19, 2009
title Crystal Structure Of Jak2 Complexed With A Potent Quinoxalin Inhibitor
authors G.A.Tavares, M.Gerspacher, M.Kroemer, C.Scheufler
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: A
Fragment: Kinase Domain
Synonym: Janus Kinase 2, Jak-2
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9de
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pacg2ttev
symmetry Space Group: C 2 2 21
R_factor 0.167 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
93.312 103.009 68.739 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand DQX, PTR BindingDB enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePotent and selective inhibition of polycythemia by the quinoxaline JAK2 inhibitor NVP-BSK805., Baffert F, Regnier CH, De Pover A, Pissot-Soldermann C, Tavares GA, Blasco F, Brueggen J, Chene P, Drueckes P, Erdmann D, Furet P, Gerspacher M, Lang M, Ledieu D, Nolan L, Ruetz S, Trappe J, Vangrevelinghe E, Wartmann M, Wyder L, Hofmann F, Radimerski T, Mol Cancer Ther. 2010 Jul;9(7):1945-55. Epub 2010 Jun 29. PMID:20587663
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (3krr.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 3KRR
  • CSU: Contacts of Structural Units for 3KRR
  • Structure Factors (462 Kb)
  • Retrieve 3KRR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KRR from S2C, [Save to disk]
  • Re-refined 3krr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KRR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KRR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KRR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3krr] [3krr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3KRR: [TyrKc ] by SMART
  • Other resources with information on 3KRR
  • Community annotation for 3KRR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science