3L8D Transferase date Dec 30, 2009
title Crystal Structure Of Methyltransferase From Bacillus Thuring
authors A.A.Fedorov, E.V.Fedorov, R.Toro, J.M.Sauder, S.K.Burley, S.C.Alm York Sgx Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Methyltransferase
Chain: A
Engineered: Yes
 Organism_scientific: Bacillus Thuringiensis
Organism_taxid: 412694
Strain: Al Hakam
Gene: Balh_1870
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.211 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.079 99.281 121.738 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand K, MSE enzyme
Gene BALH
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (3l8d.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 3L8D
  • CSU: Contacts of Structural Units for 3L8D
  • Structure Factors (241 Kb)
  • Retrieve 3L8D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3L8D from S2C, [Save to disk]
  • Re-refined 3l8d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3L8D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3L8D
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3L8D, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3l8d_A] [3l8d]
  • SWISS-PROT database: [A0RD96]
  • Domain organization of [A0RD96_BACAH] by SWISSPFAM
    • Other resources with information on 3L8D
  • Community annotation for 3L8D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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