3LJF Oxidoreductase date Jan 26, 2010
title The X-Ray Structure Of Iron Superoxide Dismutase From Pseudoalteromonas Haloplanktis (Crystal Form II)
authors A.Merlino, I.Russo Krauss, B.Rossi, M.Conte, A.Vergara, F.Sica
compound source
Molecule: Iron Superoxide Dismutase
Chain: A, C, B, D
Ec: 1.15.1.1
Engineered: Yes
Organism_scientific: Pseudoalteromonas Haloplanktis
Organism_taxid: 326442
Strain: Tac 125
Gene: Sodb, Pshaa1215
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.192 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.476 103.785 90.251 90.00 103.81 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand FE, TRE enzyme Oxidoreductase E.C.1.15.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • superoxide dismutase activit...


  • Primary referenceStructure and flexibility in cold-adapted iron superoxide dismutases: The case of the enzyme isolated from Pseudoalteromonas haloplanktis., Merlino A, Krauss IR, Castellano I, Vendittis ED, Rossi B, Conte M, Vergara A, Sica F, J Struct Biol. 2010 Aug 21. PMID:20732427
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk]
  • Biological Unit Coordinates (3ljf.pdb1.gz) 67 Kb
  • Biological Unit Coordinates (3ljf.pdb2.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 3LJF
  • CSU: Contacts of Structural Units for 3LJF
  • Structure Factors (745 Kb)
  • Retrieve 3LJF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LJF from S2C, [Save to disk]
  • Re-refined 3ljf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Visual 3D analysis of 3LJF
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  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3LJF, from MSDmotif at EBI
  • Fold representative 3ljf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ljf_A] [3ljf] [3ljf_D] [3ljf_C] [3ljf_B]
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