OCA Atlas for 3LRS

3LRS

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

NAG

enzyme

Primary reference

Crystal structure of PG16 and chimeric dissection with somatically related PG9: structure-function analysis of two quaternary-specific antibodies that effectively neutralize HIV-1., Pancera M, McLellan JS, Wu X, Zhu J, Changela A, Schmidt SD, Yang Y, Zhou T, Phogat S, Mascola JR, Kwong PD, J Virol. 2010 Aug;84(16):8098-110. Epub 2010 Jun 10. PMID:20538861

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (558 Kb) [Save to disk]

Biological Unit Coordinates (3lrs.pdb1.gz) 141 Kb

Biological Unit Coordinates (3lrs.pdb2.gz) 141 Kb

Biological Unit Coordinates (3lrs.pdb3.gz) 144 Kb

Biological Unit Coordinates (3lrs.pdb4.gz) 142 Kb

LPC: Ligand-Protein Contacts for 3LRS

CSU: Contacts of Structural Units for 3LRS

Structure Factors (562 Kb)

Retrieve 3LRS in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3LRS from S2C, [Save to disk]

Re-refined 3lrs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LRS in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lrs_C] [3lrs_B] [3lrs_D] [3lrs_E] [3lrs_F] [3lrs_H] [3lrs_L] [3lrs] [3lrs_A]

SWISS-PROT database:

Domains found in 3LRS: [IG_like] [IGv ] by SMART

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