OCA Atlas for 3LSE

3LSE

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BGC, GAL BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

N-domain of human adhesion/growth-regulatory galectin-9: preference for distinct conformers and non-sialylated N-glycans and detection of ligand-induced structural changes in crystal and solution., Solis D, Mate MJ, Lohr M, Ribeiro JP, Lopez-Merino L, Andre S, Buzamet E, Canada FJ, Kaltner H, Lensch M, Ruiz FM, Haroske G, Wollina U, Kloor M, Kopitz J, Saiz JL, Menendez M, Jimenez-Barbero J, Romero A, Gabius HJ, Int J Biochem Cell Biol. 2010 Jun;42(6):1019-29. Epub 2010 Mar 19. PMID:20227520

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]

Biological Unit Coordinates (3lse.pdb1.gz) 39 Kb

Biological Unit Coordinates (3lse.pdb2.gz) 77 Kb

LPC: Ligand-Protein Contacts for 3LSE

CSU: Contacts of Structural Units for 3LSE

Structure Factors (56 Kb)

Retrieve 3LSE in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3LSE from S2C, [Save to disk]

Re-refined 3lse structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LSE in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lse] [3lse_A]

SWISS-PROT database:

Domains found in 3LSE: [GLECT] [Gal-bind_lectin ] by SMART

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