3LW6 Transferase date Feb 23, 2010
title Crystal Structure Of Drosophila Beta1,4-Galactosyltransferas
authors B.Ramakrishnan, P.K.Qasba
compound source
Molecule: Beta-4-Galactosyltransferase 7
Chain: A
Fragment: Catalytic Domain
Synonym: Fi08434p
Ec: 2.4.1.-,
Engineered: Yes
Mutation: Yes
Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
Gene: 4-Galactosyltransferase-7, Beta-4galt7, Beta1, Beta4g Beta4galt7-Ra, Dmel_cg11780;
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23a
symmetry Space Group: P 43 21 2
R_factor 0.189 R_Free 0.221
length a length b length c angle alpha angle beta angle gamma
81.835 81.835 133.656 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.81 Å
ligand MN, MPD, UDP enzyme Transferase E.C.2.4.1 BRENDA
note 3LW6 is a representative structure

Primary referenceCrystal structure of the catalytic domain of Drosophila beta1,4-Galactosyltransferase-7., Ramakrishnan B, Qasba PK, J Biol Chem. 2010 May 14;285(20):15619-26. Epub 2010 Mar 17. PMID:20236943
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (3lw6.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 3LW6
  • CSU: Contacts of Structural Units for 3LW6
  • Structure Factors (547 Kb)
  • Retrieve 3LW6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LW6 from S2C, [Save to disk]
  • Re-refined 3lw6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LW6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LW6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3LW6, from MSDmotif at EBI
  • Fold representative 3lw6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lw6_A] [3lw6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3LW6
  • Community annotation for 3LW6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science