3LXL Transferase date Feb 25, 2010
title Structural And Thermodynamic Characterization Of The Tyk2 An Kinase Domains In Complex With Cp-690550 And Cmp-6
authors J.E.Chrencik, T.E.Benson
compound source
Molecule: Tyrosine-Protein Kinase Jak3
Chain: A
Fragment: Kinase Domain
Synonym: Janus Kinase 3, Jak-3, Leukocyte Janus Kinase, L-J
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak3
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest9
symmetry Space Group: P 21 21 21
R_factor 0.193 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.192 75.187 89.070 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.74 Å
ligand IZA BindingDB enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and Thermodynamic Characterization of the TYK2 and JAK3 Kinase Domains in Complex with CP-690550 and CMP-6., Chrencik JE, Patny A, Leung IK, Korniski B, Emmons TL, Hall T, Weinberg RA, Gormley JA, Williams JM, Day JE, Hirsch JL, Kiefer JR, Leone JW, Fischer HD, Sommers CD, Huang HC, Jacobsen EJ, Tenbrink RE, Tomasselli AG, Benson TE, J Mol Biol. 2010 May 15. PMID:20478313
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (3lxl.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 3LXL
  • CSU: Contacts of Structural Units for 3LXL
  • Structure Factors (472 Kb)
  • Retrieve 3LXL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LXL from S2C, [Save to disk]
  • Re-refined 3lxl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LXL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LXL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LXL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lxl_A] [3lxl]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3LXL: [TyrKc ] by SMART
  • Other resources with information on 3LXL
  • Community annotation for 3LXL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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