3MBY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8DG, CL, DOC, MG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMutagenic conformation of 8-oxo-7,8-dihydro-2'-dGTP in the confines of a DNA polymerase active site., Batra VK, Beard WA, Hou EW, Pedersen LC, Prasad R, Wilson SH, Nat Struct Mol Biol. 2010 Jul;17(7):889-90. Epub 2010 Jun 6. PMID:20526335
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (3mby.pdb1.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 3MBY
  • CSU: Contacts of Structural Units for 3MBY
  • Structure Factors (233 Kb)
  • Retrieve 3MBY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MBY from S2C, [Save to disk]
  • Re-refined 3mby structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MBY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mby] [3mby_A] [3mby_D] [3mby_P] [3mby_T]
  • SWISS-PROT database:
  • Domains found in 3MBY: [HhH1] [POLXc ] by SMART

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