3ME1 Transport Protein date Mar 31, 2010
title Crystal Structure Of The Desulfovibro Vulgaris Urea Transpor P3(1) Space Group At 3.86
authors E.J.Levin, M.Zhou, New York Consortium On Membrane Protein Str (Nycomps)
compound source
Molecule: Urea Transporter
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Desulfovibrio Vulgaris
Organism_taxid: 882
Strain: Hildenborough
Gene: Dvu_1160
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 31
R_factor 0.321 R_Free 0.387
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.197 103.197 141.498 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.86 Å
Gene DVU
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (218 Kb) [Save to disk]
  • Biological Unit Coordinates (3me1.pdb1.gz) 206 Kb
  • CSU: Contacts of Structural Units for 3ME1
  • Structure Factors (116 Kb)
  • Retrieve 3ME1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ME1 from S2C, [Save to disk]
  • Re-refined 3me1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ME1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3ME1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ME1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3me1_A] [3me1_C] [3me1_B] [3me1]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3ME1
  • Community annotation for 3ME1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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