3MIS	De Novo Protein Dna	date	Apr 12, 2010
title	I-Msoi Re-Designed For Altered Dna Cleavage Specificity (-8g
authors	G.K.Taylor, B.L.Stoddard
compound		source
Molecule: Mso-8g Chain: A, B Engineered: Yes		Organism_scientific: Synthetic Construct Organism_common: Artificial Gene Organism_taxid: 32630 Strain: Oke-1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet24d
Molecule: Dna (5'- D(Gpcpapgpgpapcpgptpcpgptpgpapgpapcpapgp Cpg)-3'); Chain: C Engineered: Yes Other_details: Top Strand Oligonucleotide Target		Synthetic: Yes
Molecule: Dna (5'- D(Cpgpgpapgpcptpgptpcptpcpapcpgpapcpgptp Gpc)-3'); Chain: D Engineered: Yes Other_details: Bottom Strand Oligonucleotide Target		Synthetic: Yes
symmetry	Space Group: P 1	R_factor 0.246 R_Free 0.308
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.589 42.632 71.577 72.86 72.83 71.17
method	X-Ray Diffraction	resolution	2.30 Å
ligand	CA	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Computational reprogramming of homing endonuclease specificity at multiple adjacent base pairs., Ashworth J, Taylor GK, Havranek JJ, Quadri SA, Stoddard BL, Baker D, Nucleic Acids Res. 2010 Apr 30. PMID:20435674

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk] Biological Unit Coordinates (3mis.pdb1.gz) 155 Kb LPC: Ligand-Protein Contacts for 3MIS CSU: Contacts of Structural Units for 3MIS Structure Factors (134 Kb) Retrieve 3MIS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MIS from S2C, [Save to disk] Re-refined 3mis structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MIS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MIS

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MIS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mis_D] [3mis_C] [3mis_B] [3mis] [3mis_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3MIS

Community annotation for 3MIS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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