3MJW	Transferase	date	Apr 13, 2010
title	Pi3 Kinase Gamma With A Benzofuranone Inhibitor
authors	J.Bard, K.Svenson
compound		source
Molecule: Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Ca Subunit Gamma Isoform; Chain: A Fragment: Pi3 Kinase Gamma (Unp Residues 144 To 1102) Synonym: Ptdins-3-Kinase Subunit Gamma, Pi3-Kinase Subunit Pi3k-Gamma, Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Catalytic Subunit Gamma, Ptdins-3-Kinase Subunit P110-Gamma Pi3k; Ec: 2.7.1.153 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Gene: Pik3cg Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_strain: Sf9
symmetry	Space Group: C 1 2 1	R_factor 0.225 R_Free 0.281
crystal cell	length a length b length c angle alpha angle beta angle gamma 145.600 68.573 107.246 90.00 95.02 90.00
method	X-Ray Diffraction	resolution	2.87 Å
ligand	WYF	enzyme	Transferase E.C.2.7.1.153 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	5-ureidobenzofuranone indoles as potent and efficacious inhibitors of PI3 kinase-alpha and mTOR for the treatment of breast cancer., Zhang N, Ayral-Kaloustian S, Anderson JT, Nguyen T, Das S, Venkatesan AM, Brooijmans N, Lucas J, Yu K, Hollander I, Mallon R, Bioorg Med Chem Lett. 2010 Jun 15;20(12):3526-9. Epub 2010 May 17. PMID:20483602

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (3mjw.pdb1.gz) 130 Kb LPC: Ligand-Protein Contacts for 3MJW CSU: Contacts of Structural Units for 3MJW Structure Factors (211 Kb) Retrieve 3MJW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MJW from S2C, [Save to disk] Re-refined 3mjw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MJW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MJW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MJW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mjw] [3mjw_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3MJW: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART

Other resources with information on 3MJW

Community annotation for 3MJW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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