3MLX	Immune System	date	Apr 18, 2010
title	Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With Peptide
authors	X.P.Kong
compound		source
Molecule: Human Monoclonal Anti-Hiv-1 Gp120 V3 Antibody 307 Light Chain; Chain: L, M		Organism_scientific: Homo Sapiens Organism_taxid: 9606
Molecule: Human Monoclonal Anti-Hiv-1 Gp120 V3 Antibody 307 Heavy Chain; Chain: H, I		Organism_scientific: Homo Sapiens Organism_taxid: 9606
Molecule: Hiv-1 Gp120 Third Variable Region (V3) Crown Chain: P, Q		Organism_scientific: Hiv-1 M:B_mn Organism_common: Hiv-1 Organism_taxid: 11696
symmetry	Space Group: P 1 21 1	R_factor 0.192 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.870 128.796 60.189 90.00 92.66 90.00
method	X-Ray Diffraction	resolution	1.90 Å
Gene Ontology	Chain Function Process Component Q, P
Primary reference	Conserved structural elements in the V3 crown of HIV-1 gp120., Jiang X, Burke V, Totrov M, Williams C, Cardozo T, Gorny MK, Zolla-Pazner S, Kong XP, Nat Struct Mol Biol. 2010 Aug;17(8):955-61. Epub 2010 Jul 11. PMID:20622876

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk] Biological Unit Coordinates (3mlx.pdb1.gz) 78 Kb Biological Unit Coordinates (3mlx.pdb2.gz) 77 Kb CSU: Contacts of Structural Units for 3MLX Structure Factors (830 Kb) Retrieve 3MLX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MLX from S2C, [Save to disk] Re-refined 3mlx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MLX in 3D

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Visual 3D analysis of 3MLX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MLX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mlx_L] [3mlx_Q] [3mlx] [3mlx_M] [3mlx_I] [3mlx_H] [3mlx_P] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3MLX: [IG_like] [IGv ] by SMART

Other resources with information on 3MLX

Community annotation for 3MLX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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