OCA Atlas for 3MMY

3MMY

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MES

enzyme

note

3MMY is a representative structure

Gene
Ontology

Chain	Function	Process	Component
B, F, D, H
C, G, A, E		intracellular transport of v...

Primary reference

Structural and functional analysis of the interaction between the nucleoporin Nup98 and the mRNA export factor Rae1., Ren Y, Seo HS, Blobel G, Hoelz A, Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10406-11. Epub 2010 May 24. PMID:20498086

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (276 Kb) [Save to disk]

Biological Unit Coordinates (3mmy.pdb1.gz) 71 Kb

Biological Unit Coordinates (3mmy.pdb2.gz) 71 Kb

Biological Unit Coordinates (3mmy.pdb3.gz) 71 Kb

Biological Unit Coordinates (3mmy.pdb4.gz) 71 Kb

LPC: Ligand-Protein Contacts for 3MMY

CSU: Contacts of Structural Units for 3MMY

Structure Factors (2761 Kb)

Retrieve 3MMY in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3MMY from S2C, [Save to disk]

Re-refined 3mmy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MMY in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mmy] [3mmy_A] [3mmy_B] [3mmy_C] [3mmy_D] [3mmy_E] [3mmy_F] [3mmy_G] [3mmy_H]

SWISS-PROT database:

Domain found in 3MMY: [WD40 ] by SMART

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