3N1C Transferase date May 15, 2010
title Crystal Structure Of The Phosphofructokinase-2 From Escheric In Complex With Fructose-6-Phosphate
authors H.M.Pereira, R.Cabrera, A.Caniuguir, R.C.Garratt, J.Babul
compound source
Molecule: 6-Phosphofructokinase Isozyme 2
Chain: A, B, C, D
Synonym: Phosphofructokinase-2
Ec: 2.7.1.11
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Gene: B1723, Jw5280, Pfk2, Pfkb
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21-D
symmetry Space Group: C 2 2 21
R_factor 0.180 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.793 153.605 223.790 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand F6P enzyme Transferase E.C.2.7.1.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • 6-phosphofructokinase activi...
  • phosphofructokinase activity...


  • Primary referenceThe crystal complex of phosphofructokinase-2 of Escherichia coli with fructose-6-P: kinetic and structural analysis of the allosteric ATP inhibition., Cabrera R, Baez M, Pereira HM, Caniuguir A, Garratt RC, Babul J, J Biol Chem. 2010 Dec 8. PMID:21147773
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (405 Kb) [Save to disk]
  • Biological Unit Coordinates (3n1c.pdb1.gz) 398 Kb
  • LPC: Ligand-Protein Contacts for 3N1C
  • CSU: Contacts of Structural Units for 3N1C
  • Structure Factors (1122 Kb)
  • Retrieve 3N1C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3N1C from S2C, [Save to disk]
  • Re-refined 3n1c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3N1C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3N1C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3N1C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3n1c_D] [3n1c_B] [3n1c] [3n1c_A] [3n1c_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3N1C
  • Community annotation for 3N1C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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