3N2I Transferase date May 18, 2010
title 2.25 Angstrom Resolution Crystal Structure Of A Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In C With Thymidine
authors A.S.Halavaty, G.Minasov, L.Shuvalova, J.Winsor, I.Dubrovska, S.Pe W.F.Anderson, Center For Structural Genomics Of Infectious D (Csgid)
compound source
Molecule: Thymidylate Kinase
Chain: A, B
Synonym: Dtmp Kinase
Ec: 2.7.4.9
Engineered: Yes
Organism_scientific: Vibrio Cholerae O1 Biovar Eltor
Organism_taxid: 243277
Strain: N16961
Gene: Tmk, Vc_2016
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)Codonplus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: I 41 2 2
R_factor 0.206 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.600 92.600 231.538 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand CL, THM enzyme Transferase E.C.2.7.4.9 BRENDA
Gene VC
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • thymidylate kinase activity
  • uridylate kinase activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk]
  • Biological Unit Coordinates (3n2i.pdb1.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 3N2I
  • CSU: Contacts of Structural Units for 3N2I
  • Structure Factors (415 Kb)
  • Retrieve 3N2I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3N2I from S2C, [Save to disk]
  • Re-refined 3n2i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
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  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3N2I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3n2i_B] [3n2i_A] [3n2i]
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