3NGT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AMP enzyme
Gene
Ontology
ChainFunctionProcessComponent
J, C, A, H, M, L, I, E, B, D, G, K, F, N


Primary referenceMolecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding., Souza TA, Trindade DM, Tonoli CC, Santos CR, Ward RJ, Arni RK, Oliveira AH, Murakami MT, Mol Biosyst. 2011 Apr 28. PMID:21528129
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (338 Kb) [Save to disk]
  • Biological Unit Coordinates (3ngt.pdb1.gz) 122 Kb
  • Biological Unit Coordinates (3ngt.pdb2.gz) 140 Kb
  • Biological Unit Coordinates (3ngt.pdb3.gz) 52 Kb
  • Biological Unit Coordinates (3ngt.pdb4.gz) 52 Kb
  • Biological Unit Coordinates (3ngt.pdb5.gz) 52 Kb
  • Biological Unit Coordinates (3ngt.pdb6.gz) 52 Kb
  • Biological Unit Coordinates (3ngt.pdb7.gz) 47 Kb
  • Biological Unit Coordinates (3ngt.pdb8.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 3NGT
  • CSU: Contacts of Structural Units for 3NGT
  • Structure Factors (1482 Kb)
  • Retrieve 3NGT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NGT from S2C, [Save to disk]
  • Re-refined 3ngt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3NGT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ngt] [3ngt_A] [3ngt_B] [3ngt_C] [3ngt_D] [3ngt_E] [3ngt_F] [3ngt_G] [3ngt_H] [3ngt_I] [3ngt_J] [3ngt_K] [3ngt_L] [3ngt_M] [3ngt_N]
  • SWISS-PROT database:
  • Domain found in 3NGT: [NDK ] by SMART

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