OCA Atlas for 3NJ4

3NJ4

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

AFX, NAD

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, B, D, C

Primary reference

X-ray crystal structure and binding mode analysis of human S-adenosylhomocysteine hydrolase complexed with novel mechanism-based inhibitors, haloneplanocin A analogues., Lee KM, Choi WJ, Lee Y, Lee HJ, Zhao LX, Lee HW, Park JG, Kim HO, Hwang KY, Heo YS, Choi S, Jeong LS, J Med Chem. 2011 Feb 24;54(4):930-8. Epub 2011 Jan 12. PMID:21226494

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (280 Kb) [Save to disk]

Biological Unit Coordinates (3nj4.pdb1.gz) 274 Kb

LPC: Ligand-Protein Contacts for 3NJ4

CSU: Contacts of Structural Units for 3NJ4

Structure Factors (506 Kb)

Retrieve 3NJ4 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3NJ4 from S2C, [Save to disk]

Re-refined 3nj4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NJ4 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nj4] [3nj4_A] [3nj4_B] [3nj4_C] [3nj4_D]

SWISS-PROT database:

Domains found in 3NJ4: [AdoHcyase] [AdoHcyase_NAD ] by SMART

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