3NJC Structural Genomics, Unknown Function date Jun 17, 2010
title Crystal Structure Of The Yslb Protein From Bacillus Subtilis Northeast Structural Genomics Consortium Target Sr460.
authors S.Vorobiev, M.Abashidze, J.Seetharaman, D.Wang, K.Cunningham, L. L.Owens, Y.Fang, R.Xiao, T.B.Acton, G.T.Montelione, J.F.Hunt, L.T Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Yslb Protein
Chain: A, B
Engineered: Yes
 Organism_scientific: Bacillus Subtilis Subsp. Subtilis
Organism_taxid: 224308
Strain: 168
Gene: Bsu28460, Yslb
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3) +Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.827 52.105 136.868 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.69 Å
ligand MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (3njc.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 3NJC
  • CSU: Contacts of Structural Units for 3NJC
  • Structure Factors (1747 Kb)
  • Retrieve 3NJC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NJC from S2C, [Save to disk]
  • Re-refined 3njc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3NJC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3NJC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NJC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3njc] [3njc_A] [3njc_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3NJC
  • Community annotation for 3NJC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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