3NQI Crystal structure of a Putative lipoprotein (BF3042) from Bacteroides fragilis NCTC 9343 at 1.87 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.87
ligand ACT, CD, CL, MSE, PEG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (320 Kb) [Save to disk]
  • Biological Unit Coordinates (3nqi.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (3nqi.pdb2.gz) 82 Kb
  • Biological Unit Coordinates (3nqi.pdb3.gz) 80 Kb
  • Biological Unit Coordinates (3nqi.pdb4.gz) 80 Kb
  • Biological Unit Coordinates (3nqi.pdb5.gz) 311 Kb
  • Biological Unit Coordinates (3nqi.pdb6.gz) 307 Kb
  • LPC: Ligand-Protein Contacts for 3NQI
  • CSU: Contacts of Structural Units for 3NQI
  • Structure Factors (13654 Kb)
  • Retrieve 3NQI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NQI from S2C, [Save to disk]
  • Re-refined 3nqi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NQI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NQI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NQI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nqi_D] [3nqi_B] [3nqi] [3nqi_C] [3nqi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3NQI
  • Community annotation for 3NQI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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