3NSH	Hydrolase	date	Jul 01, 2010
title	Bace-1 In Complex With Eln475957
authors	G.D.Probst, S.Bowers, J.M.Sealy, E.Brecht, N.Yao
compound		source
Molecule: Beta-Secretase 1 Chain: A, B, C Synonym: Beta-Site Amyloid Precursor Protein Cleaving Enzym Site App Cleaving Enzyme 1, Membrane-Associated Aspartic Pr Memapsin-2, Aspartyl Protease 2, Asp 2, Asp2; Ec: 3.4.23.46 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bace1, Bace, Kiaa1149 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.231 R_Free 0.279
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.155 104.592 100.155 90.00 104.50 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	957 BindingDB	enzyme	Hydrolase E.C.3.4.23.46 BRENDA
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Design and synthesis of hydroxyethylamine (HEA) BACE-1 inhibitors: Structure-activity relationship of the aryl region., Probst GD, Bowers S, Sealy JM, Stupi B, Dressen D, Jagodzinska BM, Aquino J, Gailunas A, Truong AP, Tso L, Xu YZ, Hom RK, John V, Tung JS, Pleiss MA, Tucker JA, Konradi AW, Sham HL, Jagodzinski J, Toth G, Brecht E, Yao N, Pan H, Lin M, Artis DR, Ruslim L, Bova MP, Sinha S, Yednock TA, Gauby S, Zmolek W, Quinn KP, Sauer JM, Bioorg Med Chem Lett. 2010 Oct 15;20(20):6034-9. Epub 2010 Aug 19. PMID:20822903

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk] Biological Unit Coordinates (3nsh.pdb1.gz) 64 Kb Biological Unit Coordinates (3nsh.pdb2.gz) 65 Kb Biological Unit Coordinates (3nsh.pdb3.gz) 65 Kb LPC: Ligand-Protein Contacts for 3NSH CSU: Contacts of Structural Units for 3NSH Structure Factors (1222 Kb) Retrieve 3NSH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NSH from S2C, [Save to disk] Re-refined 3nsh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NSH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NSH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3NSH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nsh_B] [3nsh] [3nsh_A] [3nsh_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3NSH

Community annotation for 3NSH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---