3NTU	Recombination	date	Jul 05, 2010
title	Rada Recombinase D302k Mutant In Complex With Amp-Pnp
authors	Y.Luo
compound		source
Molecule: Dna Repair And Recombination Protein Rada Chain: A Fragment: Unp Residues 4-322 Engineered: Yes Mutation: Yes		Organism_scientific: Methanococcus Voltae Organism_taxid: 523842 Strain: Dsm 1537 Ps Gene: Rada Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: P 61	R_factor 0.188 R_Free 0.214
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.970 84.970 104.320 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	ANP, MG, NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The RAD51 ATP cap regulates nucleoprotein filament stability., Amunugama R, He Y, Willcox S, Forties RA, Shim KS, Bundschuh R, Luo Y, Griffith J, Fishel R, J Biol Chem. 2012 Jan 24. PMID:22275364

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (3ntu.pdb1.gz) 294 Kb LPC: Ligand-Protein Contacts for 3NTU CSU: Contacts of Structural Units for 3NTU Structure Factors (272 Kb) Retrieve 3NTU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NTU from S2C, [Save to disk] Re-refined 3ntu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NTU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NTU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3NTU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ntu_A] [3ntu] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3NTU: [AAA] [HhH1 ] by SMART

Other resources with information on 3NTU

Community annotation for 3NTU at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---