OCA Atlas for 3NWM

3NWM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Structural and functional characterization of a single-chain peptide-MHC molecule that modulates both naive and activated CD8+ T cells., Samanta D, Mukherjee G, Ramagopal UA, Chaparro RJ, Nathenson SG, DiLorenzo TP, Almo SC, Proc Natl Acad Sci U S A. 2011 Aug 16;108(33):13682-7. Epub 2011 Aug 8. PMID:21825122

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]

Biological Unit Coordinates (3nwm.pdb1.gz) 63 Kb

CSU: Contacts of Structural Units for 3NWM

Structure Factors (183 Kb)

Retrieve 3NWM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3NWM from S2C, [Save to disk]

Re-refined 3nwm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NWM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nwm] [3nwm_A]

SWISS-PROT database:

Domain found in 3NWM: [IGc1 ] by SMART

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