3NYO	Transferase	date	Jul 15, 2010
title	Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In With Amp
authors	J.J.G.Tesmer, P.Singh
compound		source
Molecule: G Protein-Coupled Receptor Kinase 6 Chain: A, B Synonym: G Protein-Coupled Receptor Kinase Grk6 Ec: 2.7.11.16 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gprk6, Grk6 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_strain: High-Five Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 61	R_factor 0.222 R_Free 0.253
crystal cell	length a length b length c angle alpha angle beta angle gamma 154.574 154.574 208.117 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.92 Å
ligand	ACE, AMP, BU3, SO4	enzyme	Transferase E.C.2.7.11.16 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Molecular basis for activation of G protein-coupled receptor kinases., Boguth CA, Singh P, Huang CC, Tesmer JJ, EMBO J. 2010 Aug 20. PMID:20729810

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (391 Kb) [Save to disk] Biological Unit Coordinates (3nyo.pdb1.gz) 193 Kb Biological Unit Coordinates (3nyo.pdb2.gz) 195 Kb Biological Unit Coordinates (3nyo.pdb3.gz) 384 Kb LPC: Ligand-Protein Contacts for 3NYO CSU: Contacts of Structural Units for 3NYO Structure Factors (546 Kb) Retrieve 3NYO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NYO from S2C, [Save to disk] Re-refined 3nyo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NYO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NYO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3NYO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nyo_A] [3nyo_B] [3nyo] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3NYO: [RGS] [S_TK_X] [S_TKc ] by SMART

Other resources with information on 3NYO

Community annotation for 3NYO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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