3NYP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K, RNR enzyme
Primary referenceFluorine in medicinal chemistry: beta-fluorination of peripheral pyrrolidines attached to acridine ligands affects their interactions with G-quadruplex DNA., Campbell NH, Smith DL, Reszka AP, Neidle S, O'Hagan D, Org Biomol Chem. 2011 Mar 7;9(5):1328-31. Epub 2011 Jan 10. PMID:21221451
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (3nyp.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 3NYP
  • CSU: Contacts of Structural Units for 3NYP
  • Structure Factors (419 Kb)
  • Retrieve 3NYP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NYP from S2C, [Save to disk]
  • Re-refined 3nyp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NYP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nyp] [3nyp_A] [3nyp_B]
  • SWISS-PROT database:

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