3O5B Transferase date Jul 28, 2010
title Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii With Bound (Open State)
authors E.B.Kuettner, K.Kettner, A.Keim, T.M.Kriegel, N.Strater
compound source
Molecule: Hexokinase
Chain: A, B
Ec: 2.7.1.1
Engineered: Yes
Organism_scientific: Kluyveromyces Lactis
Organism_common: Yeast
Organism_taxid: 28985
Strain: Cbs2359152
Gene: Klla0d11352g, Rag5
Expression_system: Kluyveromyces Lactis
Expression_system_taxid: 28985
Expression_system_strain: Ja6-Delta-Rag5
Expression_system_vector_type: Pts32x
Expression_system_plasmid: Ptsrag5
symmetry Space Group: P 21 21 2
R_factor 0.204 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.140 122.200 92.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.97 Å
ligand BGC, SO4 enzyme Transferase E.C.2.7.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • hexokinase activity


  • Primary referenceCrystal Structure of Hexokinase KlHxk1 of Kluyveromyces lactis: A MOLECULAR BASIS FOR UNDERSTANDING THE CONTROL OF YEAST HEXOKINASE FUNCTIONS VIA COVALENT MODIFICATION AND OLIGOMERIZATION., Kuettner EB, Kettner K, Keim A, Svergun DI, Volke D, Singer D, Hoffmann R, Muller EC, Otto A, Kriegel TM, Strater N, J Biol Chem. 2010 Dec 24;285(52):41019-33. Epub 2010 Oct 12. PMID:20943665
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (317 Kb) [Save to disk]
  • Biological Unit Coordinates (3o5b.pdb1.gz) 311 Kb
  • LPC: Ligand-Protein Contacts for 3O5B
  • CSU: Contacts of Structural Units for 3O5B
  • Structure Factors (608 Kb)
  • Retrieve 3O5B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O5B from S2C, [Save to disk]
  • Re-refined 3o5b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3O5B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3O5B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O5B, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o5b_B] [3o5b_A] [3o5b]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3O5B
  • Community annotation for 3O5B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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