3O7L Transferase date Jul 30, 2010
title Crystal Structure Of Phospholamban (1-19):Pka C-Subunit:Amp- Complex
authors C.Y.Cheng, S.S.Taylor
compound source
Molecule: Camp-Dependent Protein Kinase Catalytic Subunit A
Chain: B
Fragment: Phospholamban Peptide
Synonym: Pka C-Alpha
Ec: 2.7.11.11
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Pkaca, Prkaca
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Camp-Dependent Protein Kinase Catalytic Subunit A
Chain: D
Synonym: Pka C-Alpha
Ec: 2.7.11.11
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Pkaca, Prkaca
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Cardiac Phospholamban
Chain: I
Synonym: Plb
Engineered: Yes

Synthetic: Yes
Other_details: Chemically Synthesized. This Sequence Occurs Naturally From Phospholamban
symmetry Space Group: P 61
R_factor 0.216 R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.193 92.193 192.186 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand ANP, MG, PEG, SEP, TPO enzyme Transferase E.C.2.7.11.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
D, B


I


Primary referenceDynamics connect substrate recognition to catalysis in protein kinase A., Masterson LR, Cheng C, Yu T, Tonelli M, Kornev A, Taylor SS, Veglia G, Nat Chem Biol. 2010 Nov;6(11):821-8. Epub 2010 Oct 3. PMID:20890288
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (3o7l.pdb1.gz) 212 Kb
  • LPC: Ligand-Protein Contacts for 3O7L
  • CSU: Contacts of Structural Units for 3O7L
  • Structure Factors (363 Kb)
  • Retrieve 3O7L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3O7L from S2C, [Save to disk]
  • Re-refined 3o7l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3O7L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3O7L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3O7L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3o7l_I] [3o7l_D] [3o7l] [3o7l_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3O7L: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 3O7L
  • Community annotation for 3O7L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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