3OG6	Cytokine Cytokine Receptor	date	Aug 16, 2010
title	The Crystal Structure Of Human Interferon Lambda 1 Complexed High Affinity Receptor In Space Group P212121
authors	Z.J.Miknis, E.Magracheva, W.Lei, A.Zdanov, S.V.Kotenko, A.Wlodawe
compound		source
Molecule: Interleukin-29 Chain: A Synonym: Il-29, Interferon Lambda-1, Ifn-Lambda-1, Cytokine Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ifnl1, Il29, Zcyto21 Expression_system: Drosophila Melanogaster Expression_system_taxid: 7227 Expression_system_strain: S2 Expression_system_vector_type: Virus Expression_system_plasmid: Pmtbipv5-His
Molecule: Interleukin 28 Receptor, Alpha (Interferon, Lambd Receptor); Chain: B Fragment: Extracellular Domain (Unp Residue 19-226) Synonym: Interleukin 28 Receptor, Alpha (Interferon, Lambda Receptor), Isoform Cra_e; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hcg_1982865, Il28ra, Rp11-10n16.1-001 Expression_system: Drosophila Melanogaster Expression_system_taxid: 7227 Expression_system_strain: S2 Expression_system_vector_type: Virus Expression_system_plasmid: Pmtbipv5-His
symmetry	Space Group: P 21 21 21	R_factor 0.184 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.960 85.790 116.510 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	BMA, GOL, NAG	enzyme
Gene	HCG
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal Structure of Human Interferon-lambda1 in Complex with Its High-Affinity Receptor Interferon-lambdaR1., Miknis Z, Magracheva E, Li W, Zdanov A, Kotenko SV, Wlodawer A, J Mol Biol. 2010 Oct 8. PMID:20934432

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk] Biological Unit Coordinates (3og6.pdb1.gz) 123 Kb LPC: Ligand-Protein Contacts for 3OG6 CSU: Contacts of Structural Units for 3OG6 Structure Factors (799 Kb) Retrieve 3OG6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OG6 from S2C, [Save to disk] Re-refined 3og6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OG6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3OG6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OG6, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1c3og6, region G:677-935 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3og6] [3og6_B] [3og6_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3OG6

Community annotation for 3OG6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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