3OKJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EP9	enzyme
Gene Ontology	Chain Function Process Component 2, N proteasome core complex, bet... A, O proteasome core complex, alp... C, Q D, R proteasome core complex, alp... E, S proteasome core complex, alp... G, U proteasome core complex, alp... H, K, V, Y I, W endopeptidase activator acti... proteasome core complex, bet... J, X endopeptidase activator acti... proteasome core complex, bet... L, Z M, 1 P, B proteasome core complex, alp... T, F
Primary reference	Elucidation of the alpha-keto-aldehyde binding mechanism: a lead structure motif for proteasome inhibition., Grawert MA, Gallastegui N, Stein M, Schmidt B, Kloetzel PM, Huber R, Groll M, Angew Chem Int Ed Engl. 2011 Jan 10;50(2):542-4. PMID:21154547

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1013 Kb) [Save to disk] Biological Unit Coordinates (3okj.pdb1.gz) 1006 Kb LPC: Ligand-Protein Contacts for 3OKJ CSU: Contacts of Structural Units for 3OKJ Structure Factors (2348 Kb) Retrieve 3OKJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OKJ from S2C, [Save to disk] Re-refined 3okj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OKJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3okj] [3okj_1] [3okj_2] [3okj_A] [3okj_B] [3okj_C] [3okj_D] [3okj_E] [3okj_F] [3okj_G] [3okj_H] [3okj_I] [3okj_J] [3okj_K] [3okj_L] [3okj_M] [3okj_N] [3okj_O] [3okj_P] [3okj_Q] [3okj_R] [3okj_S] [3okj_T] [3okj_U] [3okj_V] [3okj_W] [3okj_X] [3okj_Y] [3okj_Z] SWISS-PROT database: Domain found in 3OKJ: [Proteasome_A_N ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---