3ONH	Ligase	date	Aug 28, 2010
title	Crystal Structure Of Uba2ufd-Ubc9: Insights Into E1-E2 Inter Sumo Pathways
authors	J.Wang, A.M.Taherbhoy, H.W.Hunt, S.N.Seyedin, D.W.Miller, D.T.Hua B.A.Schulman
compound		source
Molecule: Ubiquitin-Activating Enzyme E1-Like Chain: A Fragment: Unp Residues 439-563 Synonym: Smt3-Activating Enzyme Subunit 2, Polymerase-Inter Protein 2; Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Uba2, Pip2, Ual1, Ydr390c, D9509.10 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: I 4	R_factor 0.160 R_Free 0.178
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.192 80.192 50.728 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
note	3ONH is a representative structure
Primary reference	Crystal structure of UBA2(ufd)-Ubc9: insights into E1-E2 interactions in Sumo pathways., Wang J, Taherbhoy AM, Hunt HW, Seyedin SN, Miller DW, Miller DJ, Huang DT, Schulman BA, PLoS One. 2010 Dec 30;5(12):e15805. PMID:21209884

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (3onh.pdb1.gz) 21 Kb CSU: Contacts of Structural Units for 3ONH Structure Factors (332 Kb) Retrieve 3ONH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ONH from S2C, [Save to disk] Re-refined 3onh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ONH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ONH

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ONH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3onh] [3onh_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3ONH

Community annotation for 3ONH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---