3OON Membrane Protein date Aug 31, 2010
title The Structure Of An Outer Membrance Protein From Borrelia Bu B31
authors Y.Fan, L.Bigelow, B.Feldman, A.Joachimiak, Midwest Center For St Genomics (Mcsg)
compound source
Molecule: Outer Membrane Protein (Tpn50)
Chain: A
Engineered: Yes
 Organism_scientific: Borrelia Burgdorferi
Organism_common: Lyme Disease Spirochete
Organism_taxid: 224326
Strain: B31
Gene: Bb_0167
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.212 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.089 74.784 66.760 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.79 Å
ligand MSE, SO4 enzyme
Gene BB
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3oon.pdb1.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 3OON
  • CSU: Contacts of Structural Units for 3OON
  • Structure Factors (179 Kb)
  • Retrieve 3OON in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OON from S2C, [Save to disk]
  • Re-refined 3oon structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3OON in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3OON
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OON, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3oon] [3oon_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3OON
  • Community annotation for 3OON at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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