3OOT	Hydrolase	date	Aug 31, 2010
title	Crystal Structure Analysis Of Renin-Indole-Piperazin Inhibit Complexes
authors	Z.Bocskei
compound		source
Molecule: Renin Chain: A, B Fragment: Unp Residues 67-406 Synonym: Angiotensinogenase Ec: 3.4.23.15 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ren Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Human Embryonic Kidney Cell (C
symmetry	Space Group: P 21 3	R_factor 0.182 R_Free 0.220
crystal cell	length a length b length c angle alpha angle beta angle gamma 143.554 143.554 143.554 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.55 Å
ligand	NAG, SSR BindingDB	enzyme	Hydrolase E.C.3.4.23.15 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Discovery and optimization of a new class of potent and non-chiral indole-3-carboxamide-based renin inhibitors., Scheiper B, Matter H, Steinhagen H, Stilz U, Bocskei Z, Fleury V, McCort G, Bioorg Med Chem Lett. 2010 Nov 1;20(21):6268-72. Epub 2010 Aug 21. PMID:20850300

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (3oot.pdb1.gz) 56 Kb Biological Unit Coordinates (3oot.pdb2.gz) 56 Kb LPC: Ligand-Protein Contacts for 3OOT CSU: Contacts of Structural Units for 3OOT Structure Factors (688 Kb) Retrieve 3OOT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3OOT from S2C, [Save to disk] Re-refined 3oot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3OOT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3OOT

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3OOT, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3oot_B] [3oot] [3oot_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3OOT

Community annotation for 3OOT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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