3ORY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • endonuclease activity
  • exonuclease activity
  • 5'-3' exonuclease activity


    • Primary referenceStructure of flap endonuclease 1 from the hyperthermophilic archaeon Desulfurococcus amylolyticus., Mase T, Kubota K, Miyazono K, Kawarabayasi Y, Tanokura M, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Feb 1;67(Pt, 2):209-13. Epub 2011 Jan 21. PMID:21301087
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (3ory.pdb1.gz) 113 Kb
  • Biological Unit Coordinates (3ory.pdb2.gz) 336 Kb
  • LPC: Ligand-Protein Contacts for 3ORY
  • CSU: Contacts of Structural Units for 3ORY
  • Structure Factors (515 Kb)
  • Retrieve 3ORY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ORY from S2C, [Save to disk]
  • Re-refined 3ory structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ORY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ory] [3ory_A]
  • SWISS-PROT database:
  • Domains found in 3ORY: [HhH2] [XPGI] [XPGN ] by SMART

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