OCA Atlas for 3P42

3P42

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MSE, SO4

enzyme

note

3P42 is a representative structure

Gene

E2348C ; E2348 (C. caroliniana)

Primary reference

The Crystal Structure of Escherichia coli Group 4 Capsule Protein GfcC Reveals a Domain Organization Resembling That of Wza., Sathiyamoorthy K, Mills E, Franzmann TM, Rosenshine I, Saper MA, Biochemistry. 2011 Jun 21;50(24):5465-76. Epub 2011 May 27. PMID:21449614

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (443 Kb) [Save to disk]

Biological Unit Coordinates (3p42.pdb1.gz) 113 Kb

Biological Unit Coordinates (3p42.pdb2.gz) 110 Kb

Biological Unit Coordinates (3p42.pdb3.gz) 110 Kb

Biological Unit Coordinates (3p42.pdb4.gz) 111 Kb

Biological Unit Coordinates (3p42.pdb5.gz) 220 Kb

Biological Unit Coordinates (3p42.pdb6.gz) 218 Kb

LPC: Ligand-Protein Contacts for 3P42

CSU: Contacts of Structural Units for 3P42

Structure Factors (975 Kb)

Retrieve 3P42 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3P42 from S2C, [Save to disk]

Re-refined 3p42 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3P42 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3p42] [3p42_A] [3p42_B] [3p42_C] [3p42_D]

SWISS-PROT database:

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