3PD0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 0QE, ACE, CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • phospholipase A2 activator a...


    • Primary referenceThermodynamic, enzymatic and structural effects of removing a salt bridge at the base of loop 4 in (pro)caspase-3., Walters J, Swartz P, Mattos C, Clark AC, Arch Biochem Biophys. 2011 Jan 23. PMID:21266160
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (3pd0.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (3pd0.pdb2.gz) 170 Kb
  • LPC: Ligand-Protein Contacts for 3PD0
  • CSU: Contacts of Structural Units for 3PD0
  • Structure Factors (264 Kb)
  • Retrieve 3PD0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PD0 from S2C, [Save to disk]
  • Re-refined 3pd0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3PD0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pd0] [3pd0_A] [3pd0_B]
  • SWISS-PROT database:
  • Domain found in 3PD0: [CASc ] by SMART

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