3PDJ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3PJ, NAP BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceSynthesis and optimization of novel 4,4-disubstituted cyclohexylbenzamide derivatives as potent 11beta-HSD1 inhibitors., Sun D, Wang Z, Caille S, DeGraffenreid M, Gonzalez-Lopez de Turiso F, Hungate R, Jaen JC, Jiang B, Julian LD, Kelly R, McMinn DL, Kaizerman J, Rew Y, Sudom A, Tu H, Ursu S, Walker N, Willcockson M, Yan X, Ye Q, Powers JP, Bioorg Med Chem Lett. 2011 Jan 1;21(1):405-10. Epub 2010 Oct 31. PMID:21093258
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (3pdj.pdb1.gz) 91 Kb
  • Biological Unit Coordinates (3pdj.pdb2.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 3PDJ
  • CSU: Contacts of Structural Units for 3PDJ
  • Structure Factors (593 Kb)
  • Retrieve 3PDJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PDJ from S2C, [Save to disk]
  • Re-refined 3pdj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PDJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pdj] [3pdj_A] [3pdj_B]
  • SWISS-PROT database:

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