3PE2 Transferase Transferase Inhibitor date Oct 25, 2010
title Crystal Structure Of Human Protein Kinase Ck2 In Complex Wit Inhibitor Cx-5011
authors R.Battistutta, E.Papinutto, G.Lolli, F.Pierre, M.Haddach, D.M.Ryc
compound source
Molecule: Casein Kinase II Subunit Alpha
Chain: A
Fragment: Unp Residues 1-337
Synonym: Ck II Alpha
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Csnk2a1, Ck2a1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pt7-7
symmetry Space Group: P 1 21 1
R_factor 0.178 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.510 46.437 63.585 90.00 111.73 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand E1B, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUnprecedented selectivity and structural determinants of a new class of protein kinase CK2 inhibitors in clinical stage for the treatment of cancer., Battistutta R, Cozza G, Pierre F, Papinutto E, Lolli G, Sarno S, O'Brien SE, Siddiqui-Jain A, Haddach M, Anderes K, Ryckman DM, Meggio F, Pinna LA, Biochemistry. 2011 Aug 26. PMID:21870818
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (3pe2.pdb1.gz) 117 Kb
  • LPC: Ligand-Protein Contacts for 3PE2
  • CSU: Contacts of Structural Units for 3PE2
  • Structure Factors (1188 Kb)
  • Retrieve 3PE2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PE2 from S2C, [Save to disk]
  • Re-refined 3pe2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PE2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3PE2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3PE2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pe2_A] [3pe2]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3PE2: [S_TKc ] by SMART
  • Other resources with information on 3PE2
  • Community annotation for 3PE2 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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