3Q1S date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, IPA enzyme
Gene
Ontology
ChainFunctionProcessComponent
I


Primary referenceStructure-Based Design of a Protein Immunogen that Displays an HIV-1 gp41 Neutralizing Epitope., Stanfield RL, Julien JP, Pejchal R, Gach JS, Zwick MB, Wilson IA, J Mol Biol. 2011 Dec 2;414(3):460-76. Epub 2011 Oct 15. PMID:22033480
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (3q1s.pdb1.gz) 175 Kb
  • LPC: Ligand-Protein Contacts for 3Q1S
  • CSU: Contacts of Structural Units for 3Q1S
  • Structure Factors (211 Kb)
  • Retrieve 3Q1S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q1S from S2C, [Save to disk]
  • Re-refined 3q1s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3Q1S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q1s] [3q1s_H] [3q1s_I] [3q1s_L]
  • SWISS-PROT database:
  • Domains found in 3Q1S: [IG_like] [IGv] [IL10 ] by SMART

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