3QA8 Immune System, Signaling Protein date Jan 10, 2011
title Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
authors G.Xu, Y.C.Lo, Q.Li, G.Napolitano, X.Wu, X.Jiang, M.Dreano, M.Karin,
compound source
Molecule: Mgc80376 Protein
Chain: A, B, C, D, E, F, G, H
Mutation: Yes
 Organism_scientific: Xenopus Laevis
Organism_common: Clawed Frog,Common Platanna,Platanna
Organism_taxid: 8355
symmetry Space Group: P 1
R_factor 0.308 R_Free 0.344
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.170 140.339 161.167 71.28 79.56 86.04
method X-Ray Diffractionresolution 3.60 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceCrystal structure of inhibitor of kappaB kinase beta, Xu G, Lo YC, Li Q, Napolitano G, Wu X, Jiang X, Dreano M, Karin M, Wu H, Nature. 2011 Mar 20. PMID:21423167
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1699 Kb) [Save to disk]
  • Biological Unit Coordinates (3qa8.pdb1.gz) 870 Kb
  • Biological Unit Coordinates (3qa8.pdb2.gz) 820 Kb
  • CSU: Contacts of Structural Units for 3QA8
  • Structure Factors (735 Kb)
  • Retrieve 3QA8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QA8 from S2C, [Save to disk]
  • Re-refined 3qa8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3QA8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3QA8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3QA8, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qa8_F] [3qa8_B] [3qa8] [3qa8_E] [3qa8_H] [3qa8_G] [3qa8_D] [3qa8_A] [3qa8_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3QA8: [STYKc ] by SMART
    • Other resources with information on 3QA8
  • Community annotation for 3QA8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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