3QK0	Transferase Transferase Inhibitor	date	Jan 31, 2011
title	Crystal Structure Of Pi3k-Gamma In Complex With Benzothiazol
authors	D.A.Whittington, J.Tang, P.Yakowec
compound		source
Molecule: Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Ca Subunit Gamma Isoform; Chain: A Fragment: Catalytic Domain (Unp Residues 144-1102) Synonym: Pi3-Kinase Subunit Gamma, Pi3k-Gamma, Ptdins-3-Kin Subunit Gamma, Phosphatidylinositol-4,5-Bisphosphate 3-Kina Catalytic Subunit Gamma, Ptdins-3-Kinase Subunit P110-Gamma Pi3k; Ec: 2.7.1.153 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pik3cg Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
symmetry	Space Group: C 1 2 1	R_factor 0.226 R_Free 0.277
crystal cell	length a length b length c angle alpha angle beta angle gamma 144.525 67.835 107.096 90.00 95.34 90.00
method	X-Ray Diffraction	resolution	2.85 Å
ligand	QK0, SO4 BindingDB	enzyme	Transferase E.C.2.7.1.153 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery and Optimization of a Series of Benzothiazole Phosphoinositide 3-Kinase (PI3K)/Mammalian Target of Rapamycin (mTOR) Dual Inhibitors., D'Angelo ND, Kim TS, Andrews K, Booker SK, Caenepeel S, Chen K, D'Amico D, Freeman D, Jiang J, Liu L, McCarter JD, San Miguel T, Mullady EL, Schrag M, Subramanian R, Tang J, Wahl RC, Wang L, Whittington DA, Wu T, Xi N, Xu Y, Yakowec P, Yang K, Zalameda LP, Zhang N, Hughes P, Norman MH, J Med Chem. 2011 Mar 24;54(6):1789-811. Epub 2011 Feb 18. PMID:21332118

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (286 Kb) [Save to disk] Biological Unit Coordinates (3qk0.pdb1.gz) 279 Kb LPC: Ligand-Protein Contacts for 3QK0 CSU: Contacts of Structural Units for 3QK0 Structure Factors (380 Kb) Retrieve 3QK0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QK0 from S2C, [Save to disk] Re-refined 3qk0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QK0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3QK0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QK0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qk0_A] [3qk0] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3QK0: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART

Other resources with information on 3QK0

Community annotation for 3QK0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---