3QRP	Rna Binding Protein Rna	date	Feb 18, 2011
title	Structure Of Thermus Thermophilus Cse3 Bound To An Rna Repre Product Mimic Complex
authors	M.J.Schellenberg, E.M.Gesner, E.L.Garside, A.M.Macmillan
compound		source
Molecule: Putative Uncharacterized Protein Tthb192 Chain: A Engineered: Yes		Organism_scientific: Thermus Thermophilus Hb8 Organism_taxid: 300852 Strain: Hb8 Gene: Tthb1192, Tthb192 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet30a
Molecule: Rna (5'-R(Gpupcpcpcpcpapcp(Pgp))-3') Chain: B Engineered: Yes Other_details: Crispr Rna		Synthetic: Yes Other_details: Chemically Synthesized Rna
Molecule: Rna (5'-R(P(U5p)Pgpupgpgpgpg)-3') Chain: C Engineered: Yes Other_details: Crispr Rna		Synthetic: Yes Other_details: Chemically Synthesized Rna
symmetry	Space Group: P 21 21 21	R_factor 0.175 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.057 72.405 100.225 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand	PGP, SO4, U5P	enzyme
Gene Ontology	Chain Function Process Component A nuclease activity endonuclease activity
Primary reference	Recognition and maturation of effector RNAs in a CRISPR interference pathway., Gesner EM, Schellenberg MJ, Garside EL, George MM, Macmillan AM, Nat Struct Mol Biol. 2011 May 15. PMID:21572444

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (3qrp.pdb1.gz) 80 Kb LPC: Ligand-Protein Contacts for 3QRP CSU: Contacts of Structural Units for 3QRP Structure Factors (251 Kb) Retrieve 3QRP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QRP from S2C, [Save to disk] Re-refined 3qrp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QRP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3QRP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QRP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qrp] [3qrp_B] [3qrp_C] [3qrp_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3QRP: [CRISPR_assoc ] by SMART

Other resources with information on 3QRP

Community annotation for 3QRP at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---