3QT0	Transcription	date	Feb 22, 2011
title	Revealing A Steroid Receptor Ligand As A Unique Ppargamma Ag
authors	H.Rong
compound		source
Molecule: Peroxisome Proliferator-Activated Receptor Gamma Chain: A Fragment: Unp Residues 235-505 Synonym: Ppar-Gamma, Nuclear Receptor Subfamily 1 Group C M Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pparg, Nr1c3 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Nuclear Receptor Coactivator 1 Peptide Chain: C Fragment: Unp Residies 685-700 Synonym: Ncoa-1, Class E Basic Helix-Loop-Helix Protein 74, Protein Hin-2, Rip160, Renal Carcinoma Antigen Ny-Ren-52, S Receptor Coactivator 1, Src-1; Ec: 2.3.1.48 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ncoa1, Bhlhe74, Src1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.196 R_Free 0.277
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.220 95.781 125.290 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	486	enzyme	Transferase E.C.2.3.1.48 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Revealing a steroid receptor ligand as a unique PPARgamma agonist., Lin S, Han Y, Shi Y, Rong H, Zheng S, Jin S, Lin SY, Lin SC, Li Y, Cell Res. 2012 Apr;22(4):746-56. doi: 10.1038/cr.2011.162. Epub 2011 Oct 11. PMID:21986665

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk] Biological Unit Coordinates (3qt0.pdb1.gz) 94 Kb LPC: Ligand-Protein Contacts for 3QT0 CSU: Contacts of Structural Units for 3QT0 Structure Factors (172 Kb) Retrieve 3QT0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3QT0 from S2C, [Save to disk] Re-refined 3qt0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3QT0 in 3D

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Visual 3D analysis of 3QT0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3QT0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3qt0] [3qt0_A] [3qt0_C] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3QT0: [HOLI ] by SMART

Other resources with information on 3QT0

Community annotation for 3QT0 at PDBWiki (http://pdbwiki.org)

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