3QVU Transferase date Feb 26, 2011
title Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In Com Pap And P-Nitrophenol
authors U.Alcolombri, M.Elias, D.S.Tawfik
compound source
Molecule: Sulfotransferase 1a1
Chain: A, B
Synonym: St1a1, Aryl Sulfotransferase 1, Hast1hast2, Pheno Sulfotransferase 1, Phenol-Sulfating Phenol Sulfotransferas 1, St1a3, Thermostable Phenol Sulfotransferase, Ts-Pst;
Ec: 2.8.2.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sult1a1, Stp, Stp1, Oksw-Cl.88
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.208 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.860 71.540 122.770 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand A3P, EDO, NPO enzyme Transferase E.C.2.8.2.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDirected evolution of sulfotransferases and paraoxonases by ancestral libraries., Alcolombri U, Elias M, Tawfik DS, J Mol Biol. 2011 Aug 26;411(4):837-53. Epub 2011 Jun 24. PMID:21723874
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (3qvu.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (3qvu.pdb2.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 3QVU
  • CSU: Contacts of Structural Units for 3QVU
  • Structure Factors (319 Kb)
  • Retrieve 3QVU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3QVU from S2C, [Save to disk]
  • Re-refined 3qvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3QVU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3QVU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3QVU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3qvu] [3qvu_B] [3qvu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3QVU
  • Community annotation for 3QVU at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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