3R6T Transferase Transferase Inhibitor date Mar 22, 2011
title Rat Catechol O-Methyltransferase In Complex With The Bisubst Inhibitor 4'-Fluoro-4,5-Dihydroxy-Biphenyl-3-Carboxylic Aci [(2s,4r,5r)-4-Hydroxy-5-(6-Methyl-Purin-9-Yl)-Tetrahydro-Fu Allyl}-Amide
authors A.Ehler, D.Schlatter, M.Stihle, J.Benz, M.G.Rudolph
compound source
Molecule: Catechol O-Methyltransferase
Chain: A
Ec: 2.1.1.6
Engineered: Yes
Mutation: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Comt
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.106 R_Free 0.130
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.898 55.991 77.936 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand CL, DTD, LU1, MG, NHE, SO4 enzyme Transferase E.C.2.1.1.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCatechol-O-methyltransferase in complex with substituted 3'-deoxyribose bisubstrate inhibitors., Ellermann M, Lerner C, Burgy G, Ehler A, Bissantz C, Jakob-Roetne R, Paulini R, Allemann O, Tissot H, Grunstein D, Stihle M, Diederich F, Rudolph MG, Acta Crystallogr D Biol Crystallogr. 2012 Mar;68(Pt 3):253-60. Epub 2012 Feb 14. PMID:22349227
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (3r6t.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 3R6T
  • CSU: Contacts of Structural Units for 3R6T
  • Structure Factors (1142 Kb)
  • Retrieve 3R6T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3R6T from S2C, [Save to disk]
  • Re-refined 3r6t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3R6T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3R6T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3R6T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3r6t_A] [3r6t]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3R6T
  • Community annotation for 3R6T at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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