OCA Atlas for 3R8I

3R8I

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

XCX BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Synthesis, Characterization and Biological Evaluation of Ureidofibrate-Like Derivatives Endowed with Peroxisome Proliferator-Activated Receptor Activity., Porcelli L, Gilardi F, Laghezza A, Piemontese L, Mitro N, Azzariti A, Altieri F, Cervoni L, Fracchiolla G, Giudici M, Guerrini U, Lavecchia A, Montanari R, Di Giovanni C, Paradiso A, Pochetti G, Simone GM, Tortorella P, Crestani M, Loiodice F, J Med Chem. 2011 Dec 2. PMID:22081932

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]

Biological Unit Coordinates (3r8i.pdb1.gz) 90 Kb

Biological Unit Coordinates (3r8i.pdb2.gz) 47 Kb

Biological Unit Coordinates (3r8i.pdb3.gz) 46 Kb

LPC: Ligand-Protein Contacts for 3R8I

CSU: Contacts of Structural Units for 3R8I

Structure Factors (240 Kb)

Retrieve 3R8I in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3R8I from S2C, [Save to disk]

Re-refined 3r8i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3R8I in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3r8i] [3r8i_A] [3r8i_B]

SWISS-PROT database:

Domain found in 3R8I: [HOLI ] by SMART

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