3RAU Hydrolase date Mar 28, 2011
title Crystal Structure Of The Hd-Ptp Bro1 Domain
authors R.L.Mu, J.S.Jiang, G.Snyder, P.Smith, T.Xiao
compound source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 23
Chain: A, B
Fragment: Unp Residues 2-361
Synonym: His Domain-Containing Protein Tyrosine Phosphatase Protein Tyrosine Phosphatase Td14, Ptp-Td14;
Ec: 3.1.3.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptpn23, Kiaa1471
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.172 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
37.523 61.333 80.582 85.87 81.27 87.99
method X-Ray Diffractionresolution 1.95 Å
ligand ACT, EDO, GOL enzyme Hydrolase E.C.3.1.3.48 BRENDA
Primary referenceThe Phe105 Loop of Alix Bro1 Domain Plays a Key Role in HIV-1 Release., Sette P, Mu R, Dussupt V, Jiang J, Snyder G, Smith P, Xiao TS, Bouamr F, Structure. 2011 Sep 1. PMID:21889351
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (3rau.pdb1.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 3RAU
  • CSU: Contacts of Structural Units for 3RAU
  • Structure Factors (826 Kb)
  • Retrieve 3RAU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RAU from S2C, [Save to disk]
  • Re-refined 3rau structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RAU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RAU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RAU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rau_B] [3rau] [3rau_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3RAU: [BRO1 ] by SMART
  • Other resources with information on 3RAU
  • Community annotation for 3RAU at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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