3RDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, BTN BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEvolved streptavidin mutants reveal key role of loop residue in high-affinity binding., Magalhaes ML, Czekster CM, Guan R, Malashkevich VN, Almo SC, Levy M, Protein Sci. 2011 Jul;20(7):1145-54. doi: 10.1002/pro.642. Epub 2011 May, 12. PMID:21520321
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (3rdm.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (3rdm.pdb2.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 3RDM
  • CSU: Contacts of Structural Units for 3RDM
  • Structure Factors (290 Kb)
  • Retrieve 3RDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RDM from S2C, [Save to disk]
  • Re-refined 3rdm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3RDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rdm] [3rdm_A]
  • SWISS-PROT database:

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