3RKQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the human NKX2.5 homeodomain in complex with DNA target., Pradhan L, Genis C, Scone P, Weinberg EO, Kasahara H, Nam HJ, Biochemistry. 2012 Aug 14;51(32):6312-9. Epub 2012 Aug 3. PMID:22849347
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (3rkq.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 3RKQ
  • CSU: Contacts of Structural Units for 3RKQ
  • Structure Factors (215 Kb)
  • Retrieve 3RKQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RKQ from S2C, [Save to disk]
  • Re-refined 3rkq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RKQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rkq] [3rkq_A] [3rkq_B] [3rkq_C] [3rkq_D]
  • SWISS-PROT database:
  • Domain found in 3RKQ: [HOX ] by SMART

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