3RLN Structural Basis of Cytosolic DNA Recognition by Innate Immune Receptors date
authors Jin, T.C., Xiao, T.
compound source
symmetry
R_factor
R_Free 0.2291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.25
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor., Jin T, Perry A, Jiang J, Smith P, Curry JA, Unterholzner L, Jiang Z, Horvath G, Rathinam VA, Johnstone RW, Hornung V, Latz E, Bowie AG, Fitzgerald KA, Xiao TS, Immunity. 2012 Apr 20;36(4):561-71. Epub 2012 Apr 5. PMID:22483801
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (3rln.pdb1.gz) 66 Kb
  • CSU: Contacts of Structural Units for 3RLN
  • Structure Factors (173 Kb)
  • Retrieve 3RLN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RLN from S2C, [Save to disk]
  • Re-refined 3rln structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3RLN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3RLN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3RLN, from MSDmotif at EBI
  • Fold representative 3rln from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rln_A] [3rln]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3RLN
  • Community annotation for 3RLN at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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